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| Self-similarity limits of genomic signatures | |
Wu ZB(武作兵) ; Wu, ZB (reprint author), Acad Sinica, Inst Mech, State Key Lab Nonlinear Mech, Beijing 100080, Peoples R China.
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| Source Publication | Fractals-Complex Geometry Patterns and Scaling in Nature and Society
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| 2003 | |
| Volume | 11Issue:1Pages:19-25 |
| ISSN | 0218-348X |
| Abstract | It is shown that metric representation of DNA sequences is one-to-one. By using the metric representation method, suppression of nucleotide strings in the DNA sequences is determined. For a DNA sequence, an optimal string length to display genomic signature in chaos game representation is obtained by eliminating effects of the finite sequence. The optimal string length is further shown as a self-similarity limit in computing information dimension. By using the method, self-similarity limits of bacteria complete genomic signatures are further determined. |
| Keyword | Genomic Signature Chaos Game Representation Metric Representation Chaos Game Representation Sequences |
| DOI | 10.1142/S0218348X03001574 |
| Indexed By | SCI |
| Language | 英语 |
| WOS ID | WOS:000182482100003 |
| WOS Keyword | CHAOS GAME REPRESENTATION ; SEQUENCES |
| WOS Research Area | Mathematics ; Science & Technology - Other Topics |
| WOS Subject | Mathematics, Interdisciplinary Applications ; Multidisciplinary Sciences |
| Citation statistics | |
| Document Type | 期刊论文 |
| Identifier | http://dspace.imech.ac.cn/handle/311007/33725 |
| Collection | 力学所知识产出(1956-2008) |
| Corresponding Author | Wu, ZB (reprint author), Acad Sinica, Inst Mech, State Key Lab Nonlinear Mech, Beijing 100080, Peoples R China. |
| Recommended Citation GB/T 7714 | Wu ZB,Wu, ZB . Self-similarity limits of genomic signatures[J]. Fractals-Complex Geometry Patterns and Scaling in Nature and Society,2003,11,1,:19-25. |
| APA | 武作兵,&Wu, ZB .(2003).Self-similarity limits of genomic signatures.Fractals-Complex Geometry Patterns and Scaling in Nature and Society,11(1),19-25. |
| MLA | 武作兵,et al."Self-similarity limits of genomic signatures".Fractals-Complex Geometry Patterns and Scaling in Nature and Society 11.1(2003):19-25. |
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