Periodic correlation structures in bacterial and archaeal complete genomes | |
Wu ZB(武作兵) | |
发表期刊 | CURRENT BIOINFORMATICS |
2013-04 | |
卷号 | 8期号:2页码:267-274 |
ISSN | 1574-8936 |
摘要 | The periodic transference of nucleotide strings in bacterial and archaeal complete genomes is investigated by using the metric representation and the recurrence plot method. The generated periodic correlation structures exhibit four kinds of fundamental transferring characteristics: a single increasing period, several increasing periods, an increasing quasi-period and almost noincreasing period. The mechanism of the periodic transference is further analyzed by determining all long periodic nucleotide strings in the bacterial and archaeal complete genomes and is explained as follows: both the repetition of basic periodic nucleotide strings and the transference of non-periodic nucleotide strings would form the periodic correlation structures with approximately the same increasing periods. |
关键词 | Bacterial And Archaeal Complete Genomes Periodic Correlation Structures Metric Representation Recurrence Plots Synecho Genome Mycobacterium Tuberculosis Symbolic Dynamics Organisms Nucleotide Strings |
学科领域 | 生物力学 |
URL | 查看原文 |
收录类别 | SCI |
语种 | 英语 |
WOS记录号 | WOS:000320466700015 |
项目资助者 | National Science Foundation [11172310] |
课题组名称 | LNM微纳米流体力学 |
论文分区 | 一类 |
引用统计 | |
文献类型 | 期刊论文 |
条目标识符 | http://dspace.imech.ac.cn/handle/311007/46895 |
专题 | 非线性力学国家重点实验室 |
通讯作者 | Wu ZB(武作兵) |
推荐引用方式 GB/T 7714 | Wu ZB. Periodic correlation structures in bacterial and archaeal complete genomes[J]. CURRENT BIOINFORMATICS,2013,8,2,:267-274. |
APA | Wu ZB.(2013).Periodic correlation structures in bacterial and archaeal complete genomes.CURRENT BIOINFORMATICS,8(2),267-274. |
MLA | Wu ZB."Periodic correlation structures in bacterial and archaeal complete genomes".CURRENT BIOINFORMATICS 8.2(2013):267-274. |
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