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The significance of molecular mechanics property to protein evolution 期刊论文
INTERNATIONAL JOURNAL OF DATA MINING AND BIOINFORMATICS, 2013, 卷号: 8, 期号: 1, 页码: 83-91
Authors:  Zhang LM;  Liu X(刘鑫);  Liu, X (reprint author), Chinese Acad Sci, State Key Lab Nonlinear Mech, Inst Mech, 15 Beisihuanxi Rd, Beijing 100190, Peoples R China.
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Hydrophobic Interaction  Protein Evolution  Mechanics Property  
Appendant structure plays an important role in amyloidogenic cystatin dimerization prior to domain swapping 期刊论文
Journal of Biomolecular Structure & Dynamics, 2012, 卷号: 30, 期号: 1, 页码: 102-112
Authors:  Yu YY;  Liu X(刘鑫);  He JW;  Zhang MY;  Li H;  Wei DQ;  Song YT
Adobe PDF(2363Kb)  |  Favorite  |  View/Download：834/315  |  Submit date：2012/12/04
Chicken Cystatin  Conformational Disease  Cerebral-hemorrhage  Crystal-structure  Swiss-model  c Variant  Wild-type  Protein  Mutant  Environment  Molecular Dynamic Simulation  Domain Swapping  Appendant Structure  Amyloidosis  Hydrophobic Core  
Simulated pathogenic conformational switch regions matched well with the biochemical findings 期刊论文
Journal of Biomedical Informatics., 2010, 卷号: 43, 期号: 3, 页码: 365-375
Authors:  Liu X(刘鑫);  Zhao YP(赵亚溥)
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Substitution Matrices of Residue Triplets Derived from Protein Blocks. 期刊论文
Journal of Computational Biology, 2010, 卷号: 17, 期号: 12, 页码: 1679
Authors:  Liu X(刘鑫);  Zhao YP(赵亚溥)
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hydrophobicity  Sequence Alignment  Twilight Zone.  
Switch Region for Pathogenic Structural Change in Conformational Disease and Its Prediction 期刊论文
PLoS One, 2010, 卷号: 5, 期号: 1, 页码: e8441
Authors:  Liu X(刘鑫);  Zhao YP(赵亚溥);  Zhao YP(赵亚溥)
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Generating artificial homologous proteins according to the representative family character in molecular mechanics properties - an attempt in validating an underlying rule of protein evolution 期刊论文
FEBS Letters, 2010, 卷号: 584, 期号: 5, 页码: 1059-1065
Authors:  Liu X(刘鑫);  Zhao YP(赵亚溥);  Zhao YP(赵亚溥)
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Donut-Shaped Fingerprint In Homologous Polypeptide Relationships-A Topological Feature Related To Pathogenic Structural Changes In Conformational Disease 期刊论文
Journal of Theoretical Biology, 2009, 卷号: 258, 期号: 2, 页码: 294-301
Authors:  Liu X(刘鑫);  Zhao YP(赵亚溥);  Zhao YP
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Homologous Relationship  Polypeptide  Prion Protein  Conformational Disease  Predicting Signal Peptides  State Enzyme-kinetics  Protein-structure  Graphic Rules  Codon Usage  Rate Laws  Evolution  Steady  Model  Prion  
A scheme for multiple sequences alignment optimization-an improvement based on family representative mechanics features 期刊论文
Journal of Theoretical Biology, 2009, 卷号: 261, 期号: 4, 页码: 593-597
Authors:  Liu X(刘鑫);  Zhao YP(赵亚溥)
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Scoring Scheme  Hydrophobic Interaction  Multiple Sequence Alignment  Homologous Proteins  
Significant Residue Features Revealed By Eigenvalue Decomposition Analysis Of Blosum Matrices 期刊论文
Physics Letters A, 2008, 页码: 2282-2285
Authors:  Zhang LM;  Liu X(刘鑫);  Liu, X (reprint author), Chinese Acad Sci, Inst Mech, Beijing 100080, Peoples R China.
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Protein Evolution  Residue Feature  Eigenvalue Decomposition  Blosum  Acid Substitution Matrices  Protein Blocks  
An Amino Acid Substitution Matrix for Protein Conformation Identification 期刊论文
Journal of Bioinformatics and Computational Biology, 2006, 卷号: 4, 期号: 3, 页码: 769-782
Authors:  Liu X(刘鑫);  Zheng WM(郑伟谋)
View  |  Adobe PDF(272Kb)  |  Favorite  |  View/Download：737/258  |  Submit date：2007/06/15